I have my main Domain Name : www.xxmysite.com which have Cloudflare flexible ( free ) SSL
Also i have the SUBDOMAIN running WHMCS : hosting.xxmysite.com which have a paid RapidSSL
so Now on Cloudflare the full site is set to flexible , how or what should i do to seperate the DOMAIN NAME from SUBDOMIAN
It sounds like your main domain is working properly.
If you want the subdomain to be completely separated, set its DNS entry to . That will bypass Cloudflare.
If you want that subdomain to use Full SSL, you can do this with a Page Rule. Match hosting.example.com/* and add a setting for SSL to be Strict.
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